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Pull requests: computational-cell-analytics/micro-sam

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Pull requests list

Update automatic segmentation modes in the annotator tool
#1363 by anwai98 Collaborator was merged Sep 2, 2026 Loading…
Bump the version to 1.8.13
#1362 by anwai98 Collaborator was merged Sep 1, 2026 Loading…
Fix segment anything installation from pip
#1361 by anwai98 Collaborator was merged Sep 1, 2026 Loading…
Fix multi-node IB comms training and histopathology evaluation scripts
#1359 by anwai98 Collaborator was merged Aug 31, 2026 Loading…
Add candidate pruning to tiled 3d APG propagation
#1358 by anwai98 Collaborator was merged Aug 28, 2026 Loading…
Enable IB comms for multi-node joint training
#1357 by anwai98 Collaborator was merged Aug 27, 2026 Loading…
Some APG refinement round touch-ups
#1356 by anwai98 Collaborator was merged Aug 27, 2026 Loading…
Fix napari 0.9 batch annotator compatibility
#1355 by anwai98 Collaborator was merged Aug 26, 2026 Loading…
Support napari 0.9 and bump the version to 1.8.12 (#1352)
#1354 by anwai98 Collaborator was merged Aug 26, 2026 Draft
Wire per-model-type defaults for AIS and APG postprocessing parameters
#1353 by anwai98 Collaborator was merged Aug 26, 2026 Loading…
Support napari 0.9 and bump the version to 1.8.12
#1352 by anwai98 Collaborator was merged Aug 26, 2026 Loading…
Create development version for micro-sam2
#1351 by anwai98 Collaborator was merged Aug 31, 2026 Loading…
Add randomized PanNuke padding size and offset
#1350 by anwai98 Collaborator was merged Aug 24, 2026 Loading…
Start working on APG 3d tiling
#1349 by anwai98 Collaborator was merged Aug 31, 2026 Loading…
Test exported decoder models via automatic instance segmentation
#1348 by nilsmechtel Contributor was merged Aug 25, 2026 Loading…
Start adding histopathology data
#1346 by anwai98 Collaborator was merged Aug 23, 2026 Loading…
Add all new models to registry
#1345 by anwai98 Collaborator was merged Aug 23, 2026 Loading…
Refactor parameter search scripts
#1344 by anwai98 Collaborator was merged Aug 23, 2026 Loading…
Add prototype for geodesic hybrid distance transform
#1343 by anwai98 Collaborator was merged Aug 24, 2026 Loading…
Fix UniSAM2 device placement and decoder configuration
#1342 by anwai98 Collaborator was merged Aug 21, 2026 Loading…
Make automatic segmentation decoder width configurable
#1341 by anwai98 Collaborator was merged Aug 21, 2026 Loading…
Generalize and extend refinement round for APG
#1340 by constantinpape Contributor was merged Aug 27, 2026 Loading…
Merge main to dev
#1339 by anwai98 Collaborator was merged Aug 21, 2026 Loading…
Bump version
#1338 by anwai98 Collaborator was merged Aug 20, 2026 Loading…
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