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Commits on Sep 8, 2016

• Remove some unimplemented methods in phylo

  lafita

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• Merge alignment and phylo modules #413

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Commits on Aug 18, 2016

• making output less verbose

  andreasprlic

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• setting default log level to warn

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Commits on Jul 1, 2016

• Cleanup - squid:S1858 - "toString()" should never be called on a String object

  

  Mohamed Ezzat

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Commits on Jun 16, 2016

• squid:S2272 - "Iterator.next()" methods should throw "NoSuchElementException"

  

  Mohamed Ezzat

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Commits on Jun 15, 2016

• [maven-release-plugin]prepare for next development iteration

  

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• [maven-release-plugin]prepare release biojava-5.0.0-alpha4

  

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• Merge branch 'bugfixes-4.2'

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• [maven-release-plugin]prepare for next development iteration

  

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• [maven-release-plugin]prepare release biojava-4.2.2

  

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• [maven-release-plugin] rollback the release of biojava-4.2.2

  

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• [maven-release-plugin]prepare for next development iteration

  

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• [maven-release-plugin]prepare release biojava-4.2.2

  

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• [maven-release-plugin] rollback the release of biojava-4.2.2

  

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• [maven-release-plugin]prepare release biojava-4.2.2

  

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• squid:S2063 - Comparators should be Serializable

  

  Mohamed Ezzat

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Commits on May 3, 2016

• [maven-release-plugin] prepare for next development iteration

  josemduarte

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• [maven-release-plugin] prepare release biojava-4.2.1

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• [maven-release-plugin] rollback the release of biojava-4.2.1

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• [maven-release-plugin] prepare release biojava-4.2.1

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Commits on Apr 24, 2016

• squid:S2178 - Short-circuit logic should be used in boolean contexts

  

  Mohamed Ezzat

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Commits on Mar 31, 2016

• [maven-release-plugin] prepare for next development iteration

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• [maven-release-plugin] prepare release biojava-5.0.0-alpha3

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Commits on Mar 25, 2016

• Setting 4.2.1-SNAPSHOT in all other poms

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  sbliven

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Commits on Mar 24, 2016

• [maven-release-plugin] prepare for next development iteration

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• [maven-release-plugin] prepare release biojava-5.0.0-alpha2

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Commits on Mar 17, 2016

• Added a new MMTF parsing module in biojava

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Commits on Mar 10, 2016

• [maven-release-plugin] prepare for next development iteration

  andreasprlic

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• [maven-release-plugin] prepare release biojava-4.2.0

  andreasprlic

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• Light cleanup:

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  sbliven

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• Running spacestotabs on recent changes

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  sbliven

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Commits on Mar 9, 2016

• Merge branch 'master' into removeLoadChemCompInfo

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  josemduarte

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• Removing unnecessary casts

  sbliven

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• More whitespace fixes

  sbliven

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