Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
Accelerator
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Type
/
to search
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
Uh oh!
There was an error while loading.
Please reload this page
.
biojava
/
biojava.github.io
Public
Notifications
You must be signed in to change notification settings
Fork
16
Star
4
Code
Issues
6
Pull requests
7
Actions
Security and quality
0
Insights
Additional navigation options
Code
Issues
Pull requests
Actions
Security and quality
Insights
Files
Expand file tree
tmp
Breadcrumbs
biojava.github.io
/
_site
/
wikis
/
Copy path
Directory actions
More options
More options
Directory actions
More options
More options
Latest commit
History
History
History
tmp
Breadcrumbs
biojava.github.io
/
_site
/
wikis
/
Copy path
Top
Folders and files
Name
Name
Last commit message
Last commit date
parent directory
..
3cna.A_2pel.A_cecp.png
3cna.A_2pel.A_cecp.png
AapropsSkype_20110505.html
AapropsSkype_20110505.html
AapropsSkype_20110512.html
AapropsSkype_20110512.html
AapropsSkype_20110519.html
AapropsSkype_20110519.html
AapropsSkype_20110526.html
AapropsSkype_20110526.html
AapropsSkype_20110602.html
AapropsSkype_20110602.html
AapropsSkype_20110609.html
AapropsSkype_20110609.html
AapropsSkype_20110616.html
AapropsSkype_20110616.html
AapropsSkype_20110623.html
AapropsSkype_20110623.html
AapropsSkype_20110629.html
AapropsSkype_20110629.html
AapropsSkype_20110706.html
AapropsSkype_20110706.html
AapropsSkype_20110713.html
AapropsSkype_20110713.html
AapropsSkype_20110721.html
AapropsSkype_20110721.html
AapropsSkype_20110728.html
AapropsSkype_20110728.html
AapropsSkype_20110804.html
AapropsSkype_20110804.html
AapropsSkype_20110812.html
AapropsSkype_20110812.html
AapropsSkype_20110817.html
AapropsSkype_20110817.html
Algorithm_Java_port.html
Algorithm_Java_port.html
Alig_1boo_1xva.pdb
Alig_1boo_1xva.pdb
Alignment.jpg
Alignment.jpg
AlignmentGui.png
AlignmentGui.png
AlignmentJmol.png
AlignmentJmol.png
Alignment_II.gif
Alignment_II.gif
AltAligFrame.png
AltAligFrame.png
Amr_AL-HOSSARY.html
Amr_AL-HOSSARY.html
Andreas_Dräger.html
Andreas_Dräger.html
Andreas_Prlic.html
Andreas_Prlic.html
Annotations:List.html
Annotations:List.html
Asym_biounit.png
Asym_biounit.png
Autobuild_events.html
Autobuild_events.html
BIOJAVA_LOGO_samiul.jpg
BIOJAVA_LOGO_samiul.jpg
BOSC2008_Abstract.html
BOSC2008_Abstract.html
BOSC2008_Presentation.html
BOSC2008_Presentation.html
BOSC2009_Presentation.html
BOSC2009_Presentation.html
Bio-java-logo-2.gif
Bio-java-logo-2.gif
Bio-java-logo-3.gif
Bio-java-logo-3.gif
Bio-java-logo-4.gif
Bio-java-logo-4.gif
Bio-java-logo.gif
Bio-java-logo.gif
BioJava-Installation_Guide.png
BioJava-Installation_Guide.png
BioJava3:Coding_Conventions.html
BioJava3:Coding_Conventions.html
BioJava3:HowTo.html
BioJava3:HowTo.html
BioJava3_Design.html
BioJava3_Design.html
BioJava3_Eclipse.html
BioJava3_Eclipse.html
BioJava3_Eclipse_with_SVN.html
BioJava3_Eclipse_with_SVN.html
BioJava3_Feature_Requests.html
BioJava3_Feature_Requests.html
BioJava3_NCBISequenceReader_Design.html
BioJava3_NCBISequenceReader_Design.html
BioJava3_Proposal.html
BioJava3_Proposal.html
BioJava3_eclipse.html
BioJava3_eclipse.html
BioJava3_eclipse_template.html
BioJava3_eclipse_template.html
BioJava3_license.html
BioJava3_license.html
BioJava3_logging.html
BioJava3_logging.html
BioJava3_project.html
BioJava3_project.html
BioJava:1.5ReleasePlan.html
BioJava:1.5ReleasePlan.html
BioJava:About.html
BioJava:About.html
BioJava:BioJavaInside.html
BioJava:BioJavaInside.html
BioJava:BioJavaXDocs.html
BioJava:BioJavaXDocs.html
BioJava:CambridgeDiscussion.html
BioJava:CambridgeDiscussion.html
BioJava:Community_Portal.html
BioJava:Community_Portal.html
BioJava:CooBook3:HmmerService.html
BioJava:CooBook3:HmmerService.html
BioJava:CookBook.html
BioJava:CookBook.html
BioJava:CookBook1.7.html
BioJava:CookBook1.7.html
BioJava:CookBook3.0.html
BioJava:CookBook3.0.html
BioJava:CookBook3:AddProtMod.html
BioJava:CookBook3:AddProtMod.html
BioJava:CookBook3:FASTQ.html
BioJava:CookBook3:FASTQ.html
BioJava:CookBook3:HmmerService.html
BioJava:CookBook3:HmmerService.html
BioJava:CookBook3:MSA.html
BioJava:CookBook3:MSA.html
BioJava:CookBook3:MSAProfiler.html
BioJava:CookBook3:MSAProfiler.html
BioJava:CookBook3:ModFinder.html
BioJava:CookBook3:ModFinder.html
BioJava:CookBook3:NCBIQBlastService.html
BioJava:CookBook3:NCBIQBlastService.html
BioJava:CookBook3:PSA.html
BioJava:CookBook3:PSA.html
BioJava:CookBook3:PSA_DNA.html
BioJava:CookBook3:PSA_DNA.html
BioJava:CookBook3:ParsingBlastXMLOutput.html
BioJava:CookBook3:ParsingBlastXMLOutput.html
BioJava:CookBook3:ProtMod.html
BioJava:CookBook3:ProtMod.html
BioJava:CookBook3:ProteinDisorder.html
BioJava:CookBook3:ProteinDisorder.html
BioJava:CookBook3:ProteinDisorderCLI.html
BioJava:CookBook3:ProteinDisorderCLI.html
BioJava:CookBook3:Stockholm.html
BioJava:CookBook3:Stockholm.html
BioJava:CookBook3:SupportedProtMod.html
BioJava:CookBook3:SupportedProtMod.html
BioJava:CookBook4.0.html
BioJava:CookBook4.0.html
BioJava:CookBook:AAPROP:AdvancedAminoAcidComposition.xml.html
BioJava:CookBook:AAPROP:AdvancedAminoAcidComposition.xml.html
BioJava:CookBook:AAPROP:AdvancedElementMass.xml.html
BioJava:CookBook:AAPROP:AdvancedElementMass.xml.html
BioJava:CookBook:AAPROP:AminoAcidComposition.xml.html
BioJava:CookBook:AAPROP:AminoAcidComposition.xml.html
BioJava:CookBook:AAPROP:ElementMass.xml.html
BioJava:CookBook:AAPROP:ElementMass.xml.html
BioJava:CookBook:AAPROP:MinAminoAcidComposition.xml.html
BioJava:CookBook:AAPROP:MinAminoAcidComposition.xml.html
BioJava:CookBook:AAPROP:MinElementMass.xml.html
BioJava:CookBook:AAPROP:MinElementMass.xml.html
BioJava:CookBook:AAPROP:absorbanceandextinctioncoefficient.html
BioJava:CookBook:AAPROP:absorbanceandextinctioncoefficient.html
BioJava:CookBook:AAPROP:aliphaticindex.html
BioJava:CookBook:AAPROP:aliphaticindex.html
BioJava:CookBook:AAPROP:apliphaticindex.html
BioJava:CookBook:AAPROP:apliphaticindex.html
BioJava:CookBook:AAPROP:averagehydropathyvalue.html
BioJava:CookBook:AAPROP:averagehydropathyvalue.html
BioJava:CookBook:AAPROP:commandprompt.html
BioJava:CookBook:AAPROP:commandprompt.html
BioJava:CookBook:AAPROP:instabilityindex.html
BioJava:CookBook:AAPROP:instabilityindex.html
BioJava:CookBook:AAPROP:isoelectricpoint.html
BioJava:CookBook:AAPROP:isoelectricpoint.html
BioJava:CookBook:AAPROP:main.html
BioJava:CookBook:AAPROP:main.html
BioJava:CookBook:AAPROP:molecularweight.html
BioJava:CookBook:AAPROP:molecularweight.html
BioJava:CookBook:AAPROP:netcharge.html
BioJava:CookBook:AAPROP:netcharge.html
BioJava:CookBook:AAPROP:profeat.html
BioJava:CookBook:AAPROP:profeat.html
BioJava:CookBook:AAPROP:xmlfiles.html
BioJava:CookBook:AAPROP:xmlfiles.html
BioJava:CookBook:BioSQL:Manage.html
BioJava:CookBook:BioSQL:Manage.html
BioJava:CookBook:BioSQL:SetupOracle.html
BioJava:CookBook:BioSQL:SetupOracle.html
BioJava:CookBook:BioSQL:SetupPostGre.html
BioJava:CookBook:BioSQL:SetupPostGre.html
BioJava:CookBook:Blast:Echo.html
BioJava:CookBook:Blast:Echo.html
View all files
You can’t perform that action at this time.